perfusio documentation
======================

.. toctree::
   :maxdepth: 2
   :caption: Getting Started

   getting-started

.. toctree::
   :maxdepth: 2
   :caption: Theory

   theory/model
   theory/bed
   theory/metrics

.. toctree::
   :maxdepth: 2
   :caption: Tutorials

   tutorials/T01-simulate
   tutorials/T02-hybrid-gp
   tutorials/T03-bed
   tutorials/T04-multiobjective
   tutorials/T05-transfer
   tutorials/T06-digital-twin
   tutorials/T07-real-ambr

.. toctree::
   :maxdepth: 2
   :caption: Design Guides

   choosing-acquisition
   comparison-with-datahowlab
   regulatory-considerations

.. toctree::
   :maxdepth: 1
   :caption: API Reference

   apidocs/index

.. toctree::
   :maxdepth: 1
   :caption: Project

   changelog
   limitations
   contributing